Population Consequences of Disturbance

SMRU Consulting Europe – collaborating with a team of researchers at the University of St Andrews, led by Prof. John Harwood – have developed an implementation of the NRC (2005) Population Consequences of Disturbance (PCoD).

In the UK that first resulted in the interim framework for assessing the consequences of noise disturbance on marine mammal populations that may result from the underwater noise generated by offshore renewable energy developments. This framework has been used in the UK, Netherlands and Germany. In North America, the interim framework has been developed to explore how it might be used to assess the population level impacts of Navy activities on marine mammals (ONR) and on exploring the effects of shipping on killer whales (Canada) and Cook Inlet beluga whales (NMFS).

The basic PCoD approach was developed by an international group of experts in the US Office of Naval Research Working Group on the Population Consequences of Acoustic Disturbance US National Research Council’s Committee on Characterizing Biologically Significant Marine Mammal Behaviour in its 2005 report. Their work provided the foundation for the Interim PCoD framework, which was developed at a workshop on Assessing the Risks to Marine Mammal Populations from Renewable Energy Devices, which was jointly funded by Countryside Council for Wales (now Natural Resources Wales), the Joint Nature Conservation Committee and the Natural Environment Research Centre.

The Interim PCoD framework project was commissioned and jointly funded by The Crown Estate, Marine Scotland Science, the Joint Nature Conservation Committee, The Department for Energy & Climate Change, Natural Resources Wales, Natural England and Scottish Natural Heritage. Members of each regulatory and statutory nature conservation body, along with developer representatives, participated in a steering committee for the project to ensure that the model met their needs. The framework is underpinned by a study of The Sensitivity of UK Marine Mammal Populations to Marine Renewables Developments (Harwood & King 2014) that was funded by the Natural Environment Research Council as part of its Marine Renewable Energy Knowledge Exchange programme.


Interim Population Consequences of Disturbance

The potential risk of injury and/or disturbance to marine mammals exposed to noise has been identified as a key risk.  Possible consequences of exposure to underwater noise include: disturbance that could cause marine mammals to either move away or change behaviour, suffer temporary hearing damage or permanent physical injury. The interim Population Consequences of Disturbance (iPCoD) model assesses what the longer term and larger scale impacts of these consequences are to the exposed group(s) of animals as a whole.

iPCoD is a protocol for implementing an interim version of the Population Consequences of Disturbance (PCoD) approach for assessing and quantifying the potential consequences for marine mammal populations of any disturbance and/or injury that may result from offshore energy developments.

It has been designed to use the kinds of information that are likely to be provided by developers in their Environmental Statements and Habitats Regulations Assessments. The package is developed for use in R, a free software environment for statistical computing and graphics.

The Interim PCoD framework project was commissioned and jointly funded by The Crown Estate, Marine Scotland Science, the Joint Nature Conservation Committee, The Department for Energy & Climate Change, Natural Resources Wales, Natural England and Scottish Natural Heritage.  Members of each regulatory and statutory nature conservation body, along with developer representatives, participated in a steering committee for the project to ensure that the model met their needs.  The framework is underpinned by a study of The Sensitivity of UK Marine Mammal Populations to Marine Renewables Developments (Harwood & King 2014) that was funded by the Natural Environment Research Council as part of its Marine Renewable Energy Knowledge Exchange programme.

This framework has since been used in the UK, Netherlands and Germany. In North America, the interim framework has been developed to explore how it might be used to assess the population level impacts of Navy activities on marine mammals (ONR) and models have been developed to explore the effects of shipping on killer whales (Canada) and Cook Inlet beluga whales (NMFS). Check out the other PCoD projects – PCoD Lite and PCoD+ below.


 The iPCoD version 5.2 code package

The iPCOD version 5.2 code download is available by request and contains the model, associated reports and help files. If you’d like a copy of the current iPCoD model, please email info@smruconsulting.com

The model allows the user to predict the population consequences of permanent threshold shifts (PTS) and disturbance on five marine mammal species found in the UK: bottlenose dolphins, harbour porpoise, minke whales, harbour seals and grey seals.

The results of the disturbance expert elicitation have now been processed and are incorporated in version 5 of the code. The key points from the expert elicitation were:

  • For all species the effects of disturbance on vital rates were considered to be lower than estimated in the 2013 elicitation (this is reflected in the new code)

  • In general when comparing species, harbour seals vital rates were thought to be more sensitive to disturbance than grey seals.

  • For both seal species it was expected that disturbance would be most likely to impact on fertility and the survival of the ‘weaned of the year’ animals.

  • Experts agreed that harbour porpoise would be more susceptible to the effects of disturbance than either of the seal species.

  • For harbour porpoise it was expected that disturbance would be most likely to impact on post-weaning calf survival and fertility.

Note: The new disturbance expert elicitation was not conducted for minke whales or bottlenose dolphins, so the effects of disturbance on minke whale and bottlenose dolphin vital rates have remained unchanged since v3.

We emphasise the interim nature of this approach, which was developed to deal with the current situation, where there are limited data on the way in which changes in behaviour and hearing sensitivity may affect the ability of individual marine mammals to survive and to reproduce.


Ongoing development

The iPCoD v5.2 code has been tested under various scenarios, however testing cannot be exhaustive. iPCoD is a freely available, open source programme for which SMRU Consulting rely on user participation to identify bugs and develop version updates. Bug fix/ support requests are necessary for the continued development of this package so please report any issues to info@smruconsulting.com. All updates will be communicated through the email address provided at subscription.

SMRU Consulting only supports the most recent release of iPCoD, if you require access to any of the previous versions please email us at info@smruconsulting.com.

Version Log


A note from SNCBs

Upon the release of the iPCoD software in 2014, the iPCoD steering group released the following statement on the use of iPCoD:

“The statutory nature conservation bodies (SNCBs) and regulators participated in an Interim PCoD training workshop and are now considering the scope of the tool and how and when it might be used to inform EIA and HRA processes and consenting decisions for marine renewable energy projects. Therefore some of the messages that follow are preliminary.

  1. To date, due to uncertainties about the consequences of disturbance on marine mammal individuals and populations, current consenting decisions have drawn upon expert opinion, but not always in a transparent, comparable and auditable way. Whilst Interim PCoD relies on some strong assumptions and on expert opinion, its strengths include being transparent, auditable and quantitative.

  2. SNCBs consider the Interim PCoD a novel modelling tool with potential to increase our understanding of the effects of disturbance and collision on marine mammal populations, particularly in identifying those input parameters that may most influence the modelled outcomes, and as such support its use.

  3. Developers should consult regulators and their advisers if they are considering using the Interim PCoD at an early stage i.e. before application stage.

  4. Whilst SNCBs do not anticipate a need for the Interim PCoD to be used in the EIA/HRA processes for every single development, this tool may form a useful reference in standardising the type of data submitted in impact assessments which will help when assessing cumulative effects. For large-scale developments and clusters of developments the tool may also help standardise the process for population level assessments. Decisions on when PCoD might be a useful tool should be made on a case-by-case basis in discussion with the relevant SNCBs and Regulators.

  5. One of the main strengths of the Interim PCoD may be at assessing the cumulative effect of several developments and SNCBs advise that this is better achieved at the strategic level (e.g. SEA, and/or as a result of a joint effort between regulators, their advisers and developers [e.g. regional monitoring groups]). We will be working to encourage this approach in the future.

  6. SNCBs acknowledge that there will need to be a process in place to address matters related to the interpretation of model results (e.g. thresholds of acceptable change and time frames).

  7. A joint effort involving government, regulators and industry is now needed to contribute to research on how disturbance influences life-history parameters. The outputs of this research would replace parameters in the model that have been quantified by the expert elicitation process with empirical values. There are some ongoing initiatives through NERC, ORJIP and industry led (e.g. DEPONS) but more is needed.

  8. SNCBs would welcome feedback from developers on where and how they think this tool could add value to assessment processes.”


 PCoD Lite

The PCoD Lite project, funded by the Office of Naval Research, explored how the interim Populations Consequences of Disturbance (iPCoD) might be adapted to explore the population level effects of Navy exercises on marine mammal populations. In this study we focused on populations of Blainville’s beaked whales and sperm whales on US Navy ranges in the Bahamas and around Hawai’i.

As with the development of iPCoD, we collaborated with a team of researchers at the University of St Andrews, led by Prof. John Harwood – to explore how US Navy sonar might impact some of the marine mammal populations inhabiting ranges and whether PCoD frameworks could be used in assessments.

The potential risk of injury and/or disturbance to marine mammals during US Navy activities is assessed as part of standard environmental impact assessment processes. Possible consequences of exposure to underwater noise from US Navy sonar include; disturbance that could cause marine mammals to either move away or change behaviour, suffer temporary hearing damage or permanent physical injury. The interim PCOD model assesses what the longer term and larger scale impacts of these consequences are to the exposed group(s) of animals as a whole.

Such versions of the PCOD model are considered ‘interim’, because it was developed to help manage uncertainty within the current knowledge of marine mammals, where there are limited data available on some of the key information needed. For instance, relatively little is known about how changes in behaviour and hearing sensitivity caused by exposure to underwater noise affect the ability of individual marine mammals to survive and to reproduce (their ‘vital rates’). To combat this issue, SMRU Consulting received input from over 30 international marine mammal experts who delivered a range of opinions of how disturbance might impact on these vital rates of Blainville’s beaked whales and sperm whales.

You can read the main PCoD Lite report here, which details the overall approach, how we dealt with eliciting information from experts and how the outputs of PCoD might be tailored to the US regulatory system. We also produced a report applying the PCoD Lite model for the two species of interest on ranges in the Bahamas and Hawai’i. These are very much theoretical and speculative and we specifically note:

It should be recognised that the results presented in this report are not intended in any way as an assessment of the potential effects of Navy training and testing activities on beaked whale or sperm whale populations. Nor is it intended to influence regulatory policy or control over these activities. Rather, we have attempted to show how the Interim PCoD approach can be used with information that is routinely collected on some Navy ranges, such as AUTEC, or that is provided by the Navy Acoustics Effects Model to forecast these potential effects.


PCoD+

PCoD+ is a 3 year project (2016-2019) funded by the Office of Naval Research to build upon all the work done to date on exploring the Population Consequences of Disturbance (PCoD).

Since it’s initial development, the interim PCoD framework (for renewables) has been used for offshore wind and tidal energy projects in the UK, Netherlands, Germany, Denmark and most recently in North America, exploring the effects of US Navy sonar on Blainville’s beaked whales and sperm whales, shipping on killer whales and different noise sources on beluga whales. There are also researchers all over the world working on various elements of PCoD using different modelling approaches.

This new PCOD+ effort looks to build upon the extensive foundation of PCoD projects. However there is a lot of work to be done in this new applied field of marine mammal science. The overall objective of the PCoD+ project is to overcome the most important impediments that have limited the implementation of the PCoD framework.

The PCoD+ Team

We have assembled a project team with extensive experience of the development and application of PCoD models that will develop a widely-applicable and general approach for assessing the consequences of disturbance for marine mammal populations. The Principal Investigators for this project are:

  • Dr. Cormac Booth – SMRU Consulting

  • Prof. John Harwood – St Andrews University

  • Dr. Catriona Harris – CREEM

  • Dr. Rob Schick – CREEM

  • Dr. Len Thomas – CREEM

  • Dr. Leslie New – Washington State University

  • Dr. Enrico Pirotta – Washington State University

  • Prof. Dan Costa – University of California - Santa Cruz

  • Dr. Lisa Schwarz – University of California - Santa Cruz

  • Prof. Tony O’Hagan – Professor A O’Hagan Ltd

The team will be supported by an equally-experienced Scientific Advisory Panel, and will build on the activities of the PCoD working group and the ONR- and SERDP-funded behavioral response studies. We will do this in close collaboration with two projects that have been funded by the E&P Sound and Marine Life JIP: “A Bioenergetic Model to Estimate the Population Consequences of Disturbance” (PI Dan Costa) and “Updating the Southall et al. (2007) Marine Mammal Noise Exposure Criteria” (PI Brandon Southall).